MapDisto references


How to cite MapDisto?

If you want to cite MapDisto in your paper, please use this reference:
Lorieux M (2012) MapDisto: fast and efficient computation of genetic linkage maps. Molecular Breeding 30:1231-1235 (DOI 10.1007/s11032-012-9706-y)



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Updated: Jan 26, 2016

2016
Ono, S., Sanetomo, R., & Hosaka, K. (2016). Genetic transmission of Solanum demissum (2n= 6x= 72) chromosomes from a pentaploid hybrid of S. tuberosum (2n= 4x= 48) into the aneuploid BC1 progeny. Euphytica, 207(1), 149-168.

Kariyawasam, G. K., Carter, A. H., Rasmussen, J. B., Faris, J., Xu, S. S., Mergoum, M., & Liu, Z. (2016). Genetic relationships between race-nonspecific and race-specific interactions in the wheat–Pyrenophora tritici-repentis pathosystem. TAG Theoretical and Applied Genetics, 1–12. http://doi.org/10.1007/s00122-016-2670-x

Bajgain, P., Rouse, M. N., & Anderson, J. A. (2016). Comparing Genotyping-by-Sequencing and Single Nucleotide Polymorphism Chip Genotyping for Quantitative Trait Loci Mapping in Wheat. Crop Science, 56(1), 232-248.

Chapman, M. A., Hiscock, S. J., & Filatov, D. A. (2016). The genomic bases of morphological divergence and reproductive isolation driven by ecological speciation in Senecio (Asteraceae). Journal of evolutionary biology, 29(1), 98-113.

Chao, S., Elias, E., Benscher, D., Ishikawa, G., Huang, Y. F., Saito, M., ... & Sorrells, M. (2016). Genetic Mapping of Major-Effect Seed Dormancy Quantitative Trait Loci on Chromosome 2B using Recombinant Substitution Lines in Tetraploid Wheat. Crop Science, 56(1), 59-72.

2015
Fakthongphan, J., Bai, G., Amand, P. S., Graybosch, R. A., & Baenziger, P. S. (2015). Identification of markers linked to genes for sprouting tolerance (independent of grain color) in hard white winter wheat (HWWW). TAG Theoretical and Applied Genetics, 1–12. http://doi.org/10.1007/s00122-015-2636-4

Zhang, P., Hiebert, C. W., McIntosh, R. A., McCallum, B. D., Thomas, J. B., Hoxha, S., et al. (2015). The relationship of leaf rust resistance gene Lr13 and hybrid necrosis gene Ne2m on wheat chromosome 2BS. TAG Theoretical and Applied Genetics, 1–9. http://doi.org/10.1007/s00122-015-2642-6

Varshney, R. K., Singh, V. K., Hickey, J. M., Xun, X., Marshall, D. F., Wang, J., et al. (2015). Analytical and Decision Support Tools for Genomics-Assisted Breeding. Trends in Plant Science, 1–10. http://doi.org/10.1016/j.tplants.2015.10.018

Ahmad, F. T., Mather, D. E., Law, H.-Y., Li, M., Yousif, S. A.-J., Chalmers, K. J., et al. (2015). Genetic Control of Lutein Esterification in Wheat (Triticum aestivum L.) Grain. Journal of Cereal Science, 64, 1–47. http://doi.org/10.1016/j.jcs.2015.05.007

Amelong, A., Gambín, B. L., Severini, A. D., & Borrás, L. (2015). Predicting maize kernel number using QTL information. Field Crops Research, 172, 119–131. http://doi.org/10.1016/j.fcr.2014.11.014

Arbelaez, J. D., Moreno, L. T., Singh, N., Tung, C.-W., Maron, L. G., Ospina, Y., Martinez, C. P., Grenier, C., Lorieux, M., & Mccouch, S. (2015a). Development and GBS-genotyping of introgression lines (ILs) using two wild species of rice, O. meridionalis and O. rufipogon, in a common recurrent parent, O. sativa cv. Curinga. Molecular Breeding, 35(2), 81–18. http://doi.org/10.1007/s11032-015-0276-7

Bajgain, P., Rouse, M. N., Bhavani, S., & Anderson, J. A. (2015). QTL mapping of adult plant resistance to Ug99 stem rust in the spring wheat population RB07/MN06113-8. Molecular Breeding, 35(8), 1–15. http://doi.org/10.1007/s11032-015-0362-x
CB16501434742200 copy. (2015). CB16501434742200 copy, 1–14.

Berry PM, Berry ST (2015) Understanding the genetic control of lodging-associated plant characters in winter wheat (Triticum aestivum L.). Euphytica, in press

Chatterjee, B. et al. (2015). Significance of Molecular Markers and DNA Based Technology in Research and Standardization of Medicinal Plants: A Review. Int J Res Med, 4, 5–15.

Fauziah Tufail Ahmad, Diane E. Mather, Hai-Yunn Law, Ming Li, Sana Abdul-Jabbar Yousif, Ken J. Chalmers, Robert E. Asenstorfer, Daryl J. Mares (2015) Genetic Control of Lutein Esterification in Wheat (Triticum aestivum L.) Grain. Journal of Cereal Science, DOI:10.1016/j.jcs.2015.05.007

Girard, C., Chelysheva, L., Choinard, S., Froger, N., Macaisne, N., Lehmemdi, A., et al. (2015). AAA-ATPase FIDGETIN-LIKE 1 and Helicase FANCM Antagonize Meiotic Crossovers by Distinct Mechanisms. PLoS Genetics, 11(7), e1005369–22. http://doi.org/10.1371/journal.pgen.1005369

Harrison N. R. el al. (2015). Using RNA Sequencing and In Silico Subtraction to Identify Resistance Gene Analog Markers for Lr16 in Wheat. The Plant Genome, in press. doi:10.3835/plantgenome2014.08.0040

Kassa, M. T., Menzies, J. G., & McCartney, C. A. (2015). Mapping of a resistance gene to loose smut (Ustilago tritici) from the Canadian wheat breeding line BW278. Molecular Breeding, 35(9), 1–8. http://doi.org/10.1007/s11032-015-0369-3

Khazaei, H., O’Sullivan, D. M., Jones, H., Pitts, N., Sillanpää, M. J., Pärssinen, P., et al. (2015). Flanking SNP markers for vicine–convicine concentration in faba bean (Vicia faba L.). Molecular Breeding, 35(1), 38–6. http://doi.org/10.1007/s11032-015-0214-8

Kumar, S., You, F. M., Duguid, S., Booker, H., Rowland, G., & Cloutier, S. (2015). QTL for fatty acid composition and yield in linseed (Linum usitatissimum L.). TAG Theoretical and Applied Genetics Theoretische Und Angewandte Genetik, 1–20. http://doi.org/10.1007/s00122-015-2483-3

Kumssa, Tadele T., et al. (2015) Characterization of Stem Rust Resistance in Wheat Cultivar Gage. Crop Science 55: 229-239.

Li, X., Wang, W., Wang, Z., Li, K., Lim, Y. P., & Piao, Z. (2015). Construction of chromosome segment substitution lines enables QTL mapping for flowering and morphological traits in Brassica rapa. Frontiers in Plant Science, 6, 1–32. http://doi.org/10.3389/fpls.2015.00432

Liu, Y., Qi, X., Gealy, D., Olsen, K. M., Caicedo, A. L., & Jia, Y. (2015a). QTLs Analysis for Resistance to Blast Disease in US Weedy Rice. Molecular Plant-Microbe Interactions, 150311101641004–40. http://doi.org/10.1094/MPMI-12-14-0386-R

Liu, Y., Qi, X., Young, N. D., Olsen, K. M., Caicedo, A. L., & Jia, Y. (2015b). Characterization of resistance genes to rice blast fungus Magnaporthe oryzae in a “Green Revolution” rice variety. Molecular Breeding, 35(1), 52–8. http://doi.org/10.1007/s11032-015-0256-y

Qi, X., Liu, Y., Vigueira, C. C., Young, N. D., Caicedo, A. L., Jia, Y., et al. (2015). More than one way to evolve a weed: parallel evolution of US weedy rice through independent genetic mechanisms. Molecular Ecology, 24(13), 3329–3344. http://doi.org/10.1111/mec.13256

Rath et al (2015) Inheritance and mapping of protein markers detecting polymorphism among Cajanus cajan and C. scarabaeoides genotypes with contrasting host response to pod borer (Helicoverpa armigera). International Journal of Cytology, Cytosystematics and Cytogenetics, DOI:10.1080/00087114.2015.1032611

Shi, G., Zhang, Z., Friesen, T. L., Bansal, U., Cloutier, S., Wicker, T., et al. (2015). Marker development, saturation mapping, and high-resolution mapping of the Septoria nodorum blotch susceptibility gene Snn3-B1 in wheat. Molecular Genetics and Genomics, 1–13. http://doi.org/10.1007/s00438-015-1091-x

Sousa, L. L., Gonçalves, A. O., Gonçalves-Vidigal, M. C., Lacanallo, G. F., Fernandez, A. C., Awale, H., & Kelly, J. D. (2015). Genetic Characterization and Mapping of Anthracnose Resistance of Common Bean Landrace Cultivar Corinthiano. Crop Science, 0(0), 0–11. http://doi.org/10.2135/cropsci2014.09.0604

Shi, G. et al. (2015). The Wheat Snn7 Gene Confers Susceptibility on Recognition of the Parastagonospora nodorum Necrotrophic Effector SnTox7. The Plant Genome, 8, 1–10. http://doi.org/10.3835/plantgenome2015.02.0007

Warrington, C. V., Abdel-Haleem, H., Hyten, D. L., Cregan, P. B., Orf, J. H., Killam, A. S., et al. (2015). QTL for seed protein and amino acids in the Benning × Danbaekkong soybean population. TAG Theoretical and Applied Genetics Theoretische Und Angewandte Genetik, 1–12. http://doi.org/10.1007/s00122-015-2474-4

Webb A et al. (2015) SNP-based consensus genetic map for synteny-based trait targeting in faba bean (Vicia faba L.). Plant Biotechnology Journal, in press, doi: 10.1111/pbi.12371

Winfield, M. O., Allen, A. M., Burridge, A. J., Barker, G. L. A., Benbow, H. R., Wilkinson, P. A., et al. (2015). High-density SNP genotyping array for hexaploid wheat and its secondary and tertiary gene pool. Plant Biotechnology Journal, n/a–n/a. http://doi.org/10.1111/pbi.12485

Zhang, Q., & Cheng, L. (2015). Structural Determination of (Al 2O 3) n( n= 1–15) Clusters Based on Graphic Processing Unit. Journal of Chemical Information and Modeling, 55(5), 1012–1020. http://doi.org/10.1021/acs.jcim.5b00069

Zhu, C., Tong, J., Yu, X., & Guo, W. (2015). Comparative mapping for bighead carp (Aristichthys nobilis) against model and non-model fishes provides insights into the genomic evolution of cyprinids. Molecular Genetics and Genomics, in press

2014

Khan, A., Shaik, J. S., Behnke, M., Wang, Q., Dubey, J. P., Lorenzi, H. A., ... & Sibley, L. D. (2014). NextGen sequencing reveals short double crossovers contribute disproportionately to genetic diversity in Toxoplasma gondii. BMC Genomics, 15(1), 1168.

Hayes, Ryan J., et al. (2014) The inheritance of resistance to bacterial leaf spot of lettuce caused by
Xanthomonas campestris pv. vitians in three lettuce cultivars." Horticulture Research, in press.

Faris J. D., Zhang Z., Chao S., (2014) Map-based analysis of the tenacious glume gene Tg-B1 of wild emmer and its role in wheat domestication. Gene 542: 198–208.

Amelong, A., Gambín, B. L., Severini, A. D., & Borrás, L. (2014). Predicting maize kernel number using QTL information. Field Crops Research, in press

LeBoldus, J. M., Kinzer, K., Richards, J., Ya, Z., Yan, C., Friesen, T. L., & Brueggeman, R. (2014). Genotype‐by‐sequencing of the plant pathogenic fungi Pyrenophora teres and Sphaerulina musiva utilizing Ion Torrent sequence technology. Molecular plant pathology. DOI: 10.1111/mpp.12214

Masaru Iehisa J. C. M., Ohno R., Kimura T., Enoki H., Nishimura S., Okamoto Y., Nasuda S., Takumi S., (2014) A High-Density Genetic Map with Array-Based Markers Facilitates Structural and Quantitative Trait Locus Analyses of the Common Wheat Genome. DNA Research 21 (5): 555-567

Deokar A. A., Ramsay L., Sharpe A. G., Diapari M., Sindhu A., Bett K., Warkentin T. D., Tar An B., (2014) Genome wide SNP identification in chickpea for use in development of a high density genetic map and improvement of chickpea reference genome assembly. BMC Genomics 15: 708.

Gupta S., Sangha M. K., Kaur G., Banga S., Gupta M., Kumar H., Banga S. S., (2014) QTL analysis for phytonutrient compounds and the antioxidant molecule in mustard (
Brassica juncea L.). Euphytica DOI 10.1007/s10681-014-1204-3

Lee, H. S., Jung, J. U., Kang, C. S., Heo, H. Y., & Park, C. S. Mapping of QTL for yield and its related traits in a doubled haploid population of Korean wheat. Plant Biotechnology Reports, in press

Kaur, H., & Banga, S. S. (2014). Discovery and mapping of Brassica juncea Sdt 1 gene associated with determinate plant growth habit. Theoretical and Applied Genetics, in press

Rao, P., Prasuna, K., Anuradha, G., Srividya, A., Vemireddy, L. R., Shankar, V. G., ... & Siddiq, E. A. (2014). Molecular mapping of important agro-botanic traits in sesame. Electronic Journal of Plant Breeding, 5(3), 475-488.

Cabral, A. L., Jordan, M. C., McCartney, C. A., You, F. M., Humphreys, D. G., MacLachlan, R., & Pozniak, C. J. (2014). Identification of candidate genes, regions and markers for pre-harvest sprouting resistance in wheat (
Triticum aestivum L.). BMC plant biology, 14(1), 340.

Hiebert C. W., McCallum B. D., Thomas J. B., (2014) Lr70, a new gene for leaf rust resistance mapped in common wheat accession KU3198. Theoretical and Applied Genetics DOI 10.1007/s00122-014-2356-1

Zou J., Raman H., Guo S., Hu D., Wei Z., Luo Z., Long Y., Shi W., Fu Z., Du D., Meng J., (2014) Constructing a dense genetic linkage map and mapping QTL for the traits of flower development in
Brassica carinata. Theoretical and Applied Genetics 127:1593-1605.

Gnanesh, B. N., McCartney, C. A., Eckstein, P. E., Fetch, J. W. M., Menzies, J. G., & Beattie, A. D. (2014). Genetic analysis and molecular mapping of a seedling crown rust resistance gene in oat. Theoretical and Applied Genetics, in press

Lin, Y., Gnanesh, B. N., Chong, J., Chen, G., Beattie, A. D., Fetch, J. W. M., ... & McCartney, C. A. (2014). A major quantitative trait locus conferring adult plant partial resistance to crown rust in oat. BMC plant biology, 14(1), 250.

Blair, M. W., Córdoba, J. M., Muñóz, C., & Yuyó, D. K. (2014). BAC-End Microsatellites from Intra and Inter-Genic Regions of the Common Bean Genome and Their Correlation with Cytogenetic Features. PloS one, 9(9), e101873.

Khazaei H., O’Sullivan D. M., Sillanpää M. J., Stoddard F. L., (2014) Use of synteny to identify candidate genes underlying QTL controlling stomatal traits in faba bean (Vicia faba L.). Theoretical and Applied Genetics. DOI 10.1007/s00122-014-2383-y

Ichitani K., Yamaguchi D., Taura S., Fukutoku Y., Onoue M., Shimizu K., Hashimoto F., Sakata Y., Sato M., (2014) Genetic analysis of ion-beam induced extremely late heading mutants in rice. Breed. Sci. 64: 222–230.

Divya B., Robin S., Rabindran R., Senthil S., Raveendran M., Joel A. J., (2014) Marker assisted backcross breeding approach to improve blast resistance in Indian rice (Oryza sativa) variety ADT43. Euphytica.

Faris J. D., Zhang Q., Chao S., Zhang Z., Xu S. S., (2014) Analysis of agronomic and domestication traits in a durum × cultivated emmer wheat population using a high-density single nucleotide polymorphism-based linkage map. TAG Theoretical and Applied Genetics. DOI 10.1007/s00122-014-2380-1

Shjerve R. A., Faris J. D., Brueggeman R. S., Yan C., Zhu Y., Koladia V., Friesen T. L., (2014) Evaluation of a
Pyrenophora teres f. teres mapping population reveals multiple independent interactions with a region of barley chromosome 6H. Fungal Genet. Biol. 70C: 104–112.

Saikumar S., Kalmeshwer Gouda P., Saiharini A., Varma C., Vineesha O., Padmavathi G., Shenoy V. V., (2014) Major QTL for enhancing rice grain yield under lowland reproductive drought stress identified using an O. sativa/O. glaberrima introgression line. Field Crops Research 163: 119–131.

Nacoulima N. L., Ndir K. N., Konan O., Mergeai G., (2014) Segregation Distortions in an Interspecific Cotton Population issued from the [(Gossypium hirsutum x G. raimondii) ² x G. sturtianum] Hybrid. Tropicultura.

Garzon L. N., Blair M. W., (2014) Development and mapping of SSR markers linked to resistance-gene homolog clusters in common bean. The Crop Journal: 1–18.

Rouse M. N., Talbert L. E., Singh D., Sherman J. D., (2014) Complementary epistasis involving Sr12 explains adult plant resistance to stem rust in Thatcher wheat (
Triticum aestivum L.). TAG Theoretical and Applied Genetics, in press.

Khazaei H., O’Sullivan D. M., Sillanpää M. J., Stoddard F. L., (2014) Genetic analysis reveals a novel locus in Vicia faba decoupling pigmentation in the flower from that in the extra-floral nectaries. Mol Breeding.

Xie S.-Q., Feng J.-Y., Zhang Y.-M., (2014) Linkage group correction using epistatic distorted markers in F2 and backcross populations. Heredity 112:479-488

Faris J. D., Zhang Z., Garvin D. F., Xu S. S., (2014) Molecular and comparative mapping of genes governing spike compactness from wild emmer wheat. Mol Genet Genomics, in press

Shakiba E., Eizenga G. C., (2014) Unraveling the Secrets of Rice Wild Species. In:Yan W, Bao J (Eds.), Rice - Germplasm, Genetics and Improvement, Intech, 1, pp. 1–57.

Ma J., Jia M., Jia Y., (2014) Characterization of rice blast resistance gene Pi61(t) in rice germplasm. Plant Disease, in press.

Romero, L. E., Lozano, I., Garavito, A., Carabali, S. J., Triana, M., Villareal, N., ... & Lorieux, M. (2014). Major QTLs control resistance to Rice hoja blanca virus and its vector Tagosodes orizicolus. G3: Genes| Genomes| Genetics, 4(1), 133-142.


Cichy K. A., Fernandez A., Kilian A., Kelly J. D., Galeano C. H., Shaw S., Brick M., Hodkinson D., Troxtell E., (2014) QTL analysis of canning quality and color retention in black beans (Phaseolus vulgaris L.). Mol Breeding 33: 139–154.

Diolaa, Valdir, and Roberto Fritsche-Netob. "Genes Prospection." Biotechnology and Plant Breeding: Applications and Approaches for Developing Improved Cultivars (2014): 135.

Moran T., Fontdevila A., (2014) Genome-Wide Dissection of Hybrid Sterility in Drosophila Confirms a Polygenic Threshold Architecture. Journal of Heredity, in press


Williams K., Sorrells M. (2013). Three dimensional seed size and shape QTL in hexaploid wheat (Triticum aestivum L.) populations. Crop Science 54.1 (2014): 98-110.

Sherman JD et al, (2014) Genetic Basis of Agronomic Differences between a Modern and a Historical Spring Wheat Cultivar Crop Science,
54: 1-13.

Howell, P., Leigh, F., Bates, R., Gosman, N., Trafford, K., Powell, W., et al. (2014). Rapid marker-assisted development of advanced recombinant lines from barley starch mutants. Molecular Breeding. 33.1 (2014): 243-248.

Lopez-Vera E. E., Nelson S., Singh R. P., Basnet B. R., Haley S. D., Bhavani S., Huerta-Espino J., Xoconostle-Cazares B. G., Ruiz-Medrano R., Rouse M. N., Singh S., (2014) Resistance to stem rust Ug99 in six bread wheat cultivars maps to chromosome 6DS. Theoretical and Applied Genetics, 127(1), 231-239.

Romero G., Vásquez L. M., Lashermes P., Herrera J. C., (2013) Identification of a major QTL for adult plant resistance to coffee leaf rust ( Hemileia vastatrix) in the natural Timor hybrid ( Coffea arabicax C. canephora) (T Debener, Ed.). Plant Breeding
133.1: 121-129.

Kiranmayi, S. L., Manorama, K., Venkata, V. G. N., Radhika, K., Cheralu, C., Roja, V., & Sarla, N. (2014). Identification of markers associated with iron and zinc concentration in recombinant inbred lines of brown rice. Indian Journal of Genetics and Plant Breeding (The), 74(4), 423-429.

2013


Bray M. J., Werner T., Dyer K. A., (2013) Two genomic regions together cause dark abdominal pigmentation in Drosophila tenebrosa. Heredity 112: 454–462.

Astudillo C., Fernandez A. C., Blair M. W., Cichy K. A., (2013) The Phaseolus vulgaris ZIP gene family: identification, characterization, mapping, and gene expression. Front. Plant Sci. 4: 286.

Kassa M. T., Menzies J. G., McCartney C. A., (2013) Mapping of the loose smut resistance gene Ut6 in wheat (Triticum aestivum L.). Mol Breeding. DOI 10.1007/s11032-013-9973-2

Arruda MP et al, (2013) FHB RESISTANCE QTL MAPPING USING NATIVE SOURCE OF RESISTANCE AND SNP-GBS MARKERS. Proceedings of the (2013) National Fusarium Head Blight Forum. December 3-5, (2013), Milwaukee, WI USA

Hyeonso Ji, Hakbum Kim, Doh-Won Yun, Ung-Han Yoon, Tae-Ho Kim, Moo-Young Eun, Gang-Seob Lee (2013) Characterization and fine mapping of a shortened uppermost internode mutant in rice. Plant Biotechnology Reports, in press

Kwon S. J., Smýkal P., Hu J., Wang M., Kim S.-J., McGee R. J., McPhee K., Coyne C. J., (2013) User-friendly markers linked to Fusarium wilt race 1 resistance Fwgene for marker-assisted selection in pea (W Link, Ed.). Plant Breeding: doi:10.1111/pbr.12085

Gnanesh, B. N., Mitchell Fetch, J., Menzies, J. G., Beattie, A. D., Eckstein, P. E., & McCartney, C. A. (2013). Chromosome location and allele-specific PCR markers for marker-assisted selection of the oat crown rust resistance gene Pc91. Molecular Breeding 6:642-648

Goudemand, E., Laurent, V., Duchalais, L., Tabib Ghaffary, S. M., Kema, G. H. J., Lonnet, P., et al. (2013). Association mapping and meta-analysis: two complementary approaches for the detection of reliable Septoria tritici blotch quantitative resistance in bread wheat (Triticum aestivum L.). Molecular Breeding. doi:10.1007/s11032-013-9890-4

Liu, F., Sun, F., Li, J., Xia, J. H., Lin, G., Tu, R. J., & Yue, G. H. (2013). A microsatellite-based linkage map of salt tolerant tilapia (
Oreochromis mossambicus x Oreochromis spp.) and mapping of sex-determining loci. BMC Genomics, 14, 58. doi:10.1186/1471-2164-14-58

Mirouze, M. et al. (2012). Loss of DNA methylation affects the recombination landscape in Arabidopsis. PNAS Early Edition www.pnas.org/cgi/doi/10.1073/pnas.1120841109

Kumawat, G., Raje, R. S., Bhutani, S., Pal, J. K., Mithra, A. S., Gaikwad, K., Sharma, T. R., et al. (2012). Molecular mapping of QTLs for plant type and earliness traits in pigeonpea (Cajanus cajan L. Millsp.). BMC Genetics, 13(1), 84. doi:10.1186/1471-2156-13-84

Gioia, T., Logozzo, G., Kami, J., Zeuli, P. S., & Gepts, P. (2012). Identification and Characterization of a Homologue to the Arabidopsis INDEHISCENT Gene in Common Bean. Journal of Heredity. doi:10.1093/jhered/ess102

Ramaekers, L., Galeano, C. H., Garzón, N., Vanderleyden, J., & Blair, M. W. (2013). Identifying quantitative trait loci for symbiotic nitrogen fixation capacity and related traits in common bean. Molecular Breeding 31:163-180

Allen, A. M., Barker, G. L. A., Wilkinson, P., Burridge, A., Winfield, M., Coghill, J., et al. (2012). Discovery and development of exome-based, co-dominant single nucleotide polymorphism markers in hexaploid wheat (
Triticum aestivum L.). Plant Biotechnology Journal, n/a–n/a. doi:10.1111/pbi.12009

Panigrahi, J., Mishra, R. R., Sahu, A. R., Rath, S. C., & Kole, C. R. (2013). Marker-Assisted Breeding for Stress Resistance in Crop Plants (pp. 387–426). India: Springer India. doi:10.1007/978-81-322-0807-5_16

Alvarez Prado, S., López, C. G., Gambín, B. L., Abertondo, V. J., & Borrás, L. (2013). Dissecting the genetic basis of physiological processes determining maize kernel weight using the IBM (B73×Mo17) Syn4 population. Field Crops Research, 145, 33–43. doi:10.1016/j.fcr.(2013).02.002

2012

Yatabe-Kakugawa, Y., Tsutsumi, C., Hirayama, Y., Tsuneki, S., Murakami, N., & Kato, M. (2012). Transmission ratio distortion of molecular markers in a doubled haploid population originated from a natural hybrid between
Osmunda japonica and O. lancea. Journal of Plant Research. doi:10.1007/s10265-012-0540-4

Bowers, J. E., Bachlava, E., & Brunick, R. L. (2012). Development of a 10,000 Locus Genetic Map of the Sunflower Genome Based on Multiple Crosses. G3: Genes | Genomes | Genetics doi:10.1534/g3.112.002659/-/DC1

Al-Niemi et al. (2012). Genetic Analysis of an Interspecific Cross in Ornamental Viburnum (
Viburnum). Journal of Heredity, 103(1), 2–12. doi:10.1093/jhered/esr133

Lepers-Andrzejewski, S., et al. (2012). Genetic Linkage Map and Diversity Analysis of Tahitian Vanilla (×, Orchidaceae). Crop Science, 52(2), 795–806

Marie Foulongne-Oriol (2012). Genetic linkage mapping in fungi: current state, applications, and future trends. Applied Microbiology and Biotechnology 95(4), 891–904. doi:10.1007/s00253-012-4228-4

Vikram, P et al. (2012). Bulk segregant analysis: “An effective approach for mapping consistent-effect drought grain yield QTLs in rice.” Field Crops Research 13:185–192

Diouf, F., & Mergeai, G. (2012). Distorsions de ségrégation et amélioration génétique des plantes (synthèse bibliographique). Biotechnol. Agron. Soc. Environ. 16(4), 499-508.

Naruoka, Y., et al. (2012). Genetic Analysis of Green Leaf Duration in Spring Wheat. Crop Science, 52(1), 99. doi:10.2135/cropsci2011.05.0269

Balaji Suresh, P., Srikanth, B., Hemanth Kishore, V., Subhakara Rao, I., Vemireddy, L. R., Dharika, N., Sundaram, R. M., et al. (2012). Fine mapping of Rf3 and Rf4 fertility restorer loci of WA-CMS of rice (Oryza sativa L.) and validation of the developed marker system for identification of restorer lines. Euphytica, 187(3), 421–435. doi:10.1007/s10681-012-0737-6

Breton, C., Gil, A., Wargnier, J., Serieys, H., & Bervillé, A. (2012). Transfer of architectural traits from perennial Helianthus mollis Lam. to sunflower (H. annuus L.) and localisation of introgression. Euphytica, 186(2), 557–572. doi:10.1007/s10681-012-0656-6

Njau, P. N., Bhavani, S., Huerta-Espino, J., Keller, B., & Singh, R. P. (2012). Identification of QTL associated with durable adult plant resistance to stem rust race Ug99 in wheat cultivar “Pavon 76.” Euphytica. doi:10.1007/s10681-012-0763-4

Isabella D’Anna et al. (2012) Analysis of the Association Between Pristionchus and Beetles with Emphasis on the Special Case of P. uniformis. : PhD thesis, Eberhard Karls Universität Tübingen, 1–94.

Utomo HS, Ida Wenefrida and Steve D. Linscombe (2012). Progression of DNA Marker and the Next Generation of Crop Development, Crop Plant, Dr Aakash Goyal (Ed.), ISBN: 978-953-51-0527-5, InTech, Available from: http://www.intechopen.com/books/crop-plant/progression-of-dna-marker-and-the-next-generation-of-crop-development

Akinbo, O et al. (2012) QTL Analysis for Root Protein in a Backcross Family of Cassava Derived from
Manihot esculenta ssp flabellifolia. Tropical Plant Biology DOI: 10.1007/s12042-012-9095-8

Breton, C., et al. (2012). Transfer of architectural traits from perennial
Helianthus mollis Lam. to sunflower (H. annuus L.) and localisation of introgression. Euphytica. doi:10.1007/s10681-012-0656-6

Ichitani, K.et al. (2012). Chromosomal Location of HCA1 and HCA2, Hybrid Chlorosis Genes in Rice. International Journal of Plant Genomics, 2012, 1–9. doi:10.1155/2012/649081

Lewis, MF (2012) Developing a DNA fingerprint for midwest six-rowed malting barley. Dissertation Submitted to the Graduate Faculty of the North Dakota State University of Agriculture and Applied Science

Wezi Mkwaila and James D. Kelly. IDENTIFICATION AND VALIDATION OF QTL FOR RESISTANCE TO WHITEMOLD IN TWO PINTO BEAN RIL POPULATIONS. Ann Rep of the Bean Improvement Cooperative (2012) pp.157-158

Angulo L (2012) EVALUACIÓN DE LA ASOCIACIÓN ENTRE MARCADORES MICROSATÉLITES Y COMPONENTES DEL RENDIMIENTO EN LÍNEAS AVANZADAS RC1F4 DEL CRUCE ENTRE
Oryza sativa L. y Oryza rufipogon Griff. Tesis de Doctorado en Ciencias Agrícolas, Universidad Central de Venezuela, Facultad de Agronomía. MARACAY, 27 de OCTUBRE DE 2012


2011

Diola, V., Brito, G. G., Caixeta, E. T., Maciel-Zambolim, E., Sakiyama, N. S., & Loureiro, M. E. (2011). High-density genetic mapping for coffee leaf rust resistance. Tree Genetics & Genomes, 7(6), 1199–1208. doi:10.1007/s11295-011-0406-2

Chhuneja, P., Kumar, K., Stirnweis, D., Hurni, S., Keller, B., Dhaliwal, H. S., & Singh, K. (2011). Identification and mapping of two powdery mildew resistance genes in Triticum boeoticum L. Theoretical and Applied Genetics, 124(6), 1051–1058. doi:10.1007/s00122-011-1768-4


Garcia, R. A. V., Rangel, P. N., Bassinello, P. Z., Brondani, C., Melo, L. C., Sibov, S. T., & Vianello-Brondani, R. P. (2011). QTL mapping for the cooking time of common beans. Euphytica, 186(3), 779–792. doi:10.1007/s10681-011-0587-7

Vikram P et al. qDTY1.1, a major QTL for rice grain yield under reproductive-stage drought stress with a consistent effect in multiple elite genetic backgrounds. BMC Genetics (2011) vol. 12 pp. 89. doi:10.1186/1471-2156-12-89

Subhakara Rao et al. Indel polymorphism in sugar translocation and transport genes associated with grain filling of rice (Oryza sativa L.). Mol Breeding (2011) DOI 10.1007/s11032-011-9618-2

Naruoka Y., L. E. Talbert, S. P. Lanning, N. K. Blake, J. M. Martin and J. D. Sherman. Identification of quantitative trait loci for productive tiller number and its relationship to agronomic traits in spring wheat. Theor Appl Genet (2011) DOI: 10.1007/s00122-011-1646-0

Christians et al. Quantitative Trait Locus (QTL) Mapping Reveals a Role for Unstudied Genes in Aspergillus Virulence. PLoS One (2011) vol. 6 (4) pp. e19325

Garcia et al. The characterization of a new set of EST-derived simple sequence repeat (SSR) markers as a resource for the genetic analysis of Phaseolus vulgaris. BMC Genet (2011) vol. 12 (1) pp. 41

Millie Burrell et al. A comparative genomic map for Caulanthus amplexicaulis and related species (Brassicaceae). Molecular Ecology 2011) 20:784-798

Navabi et al. Analysis of B-genome chromosome introgression in inter-specific hybrids of Brassica napus × B. carinata. Genetics (2011) vol. 187 pp. 659-673

Simbaquera, J., Cotes, A., & Barrero, S. (2011). Linkage mapping of candidate genes for induced resistance and growth promotion by Trichoderma koningiopsis (Th003) IN TOMATO Solanum Lycopersicum. Acta Biol. Colomb., 16, 47–62.

Fernández, H., Guevara, C., & Vicente, F. S. (2011). Detección de marcadores microsatélites asociados con la resistencia a Curvularia pallescens (Boedijn) en maíz. Revista Científica UDO Agrícola 11 (1): 89-96. 2011

2010

Belzile, F., Mayerhofer, R., Archibald, C., Bowles, V., & Good, A. G. (2010). Development of molecular markers and linkage maps for the Carthamus species C. tinctorius and C. oxyacanthus. Genome 53(4), 266–276. doi:10.1139/G10-002

Liu, X., Guo, L., You, J., Liu, X., He, Y., Yuan, J., et al. (2010). Progress of segregation distortion in genetic mapping of plants. Research Journal of Agronomy, 4(4), 78–83.

Archibald, C. Linkage mapping, phenotypic characterization, and introgression analysis of crosses with safflower (Carthamus tinctorius). Master of Science Thesis, University of Alberta, Dec 2010

Ali et al. Chromosome Segment Substitution Lines: A Powerful Tool for the Introgression of Valuable Genes from
Oryza Wild Species into Cultivated Rice (O. sativa). Rice (2010) vol. 3 (4) pp. 218-234

Blake et al. Identification of a quantitative trait locus for resistance to
Sitodiplosis osellana (Géhin), the orange wheat blossom midge, in spring wheat. Plant Breeding (2010) doi:10.1111/j.1439-0523.2010.01809.x

Chung et al. Characterization and fine-mapping of a resistance locus for northern leaf blight in maize bin 8.06. Theor Appl Genet (2010) 121:205–227

Mayerhofer et al. Development of molecular markers and linkage maps for the
Carthamus species C. tinctorius and C. oxyacanthus. Genome (2010) 53: 266–276

Häffner et al. Genetic and environmental control of the Verticillium syndrome in Arabidopsis thaliana. BMC Plant Biology (2010) 10:235

Chen et al. Identification of QTL for oil content, seed yield, and flowering time in oilseed rape (
Brassica napus). Euphytica (2010) 175:161–174

Córdoba et. Integration of physical and genetic maps of contentmmon bean through BAC-derived microsatellite markers. BMC Genomics (2010), 11:436

Gutierrez et al. Identification of a Rice Stripe Necrosis Virus resistance locus and yield component QTLs using
Oryza sativa x O. glaberrima introgression lines. BMC Plant Biol (2010) vol. 10 (1) pp. 6

Orjuela et al. A universal core genetic map for rice. Theor Appl Genet (2010) vol. 120 (3) pp. 563-572

Pannebakker B et al. The quantitative genetic basis of sex ratio variation in
Nasonia vitripennis: a QTL study (2010)

Sherman et al. Identification of Novel QTL for Sawfly Resistance in Wheat. Crop Science (2010) vol. 50 (1) pp. 73-86

Vergne et al. Preformed expression of defense is a hallmark of partial resistance to rice blast fungal pathogen
Magnaporthe oryzae. BMC Plant Biology (2010) 10:206

Wu et al. Comparative analyses of linkage maps and segregation distortion of two F 2 populations derived from japonica crossed with indica rice. Hereditas (2010) 147: 225–236 (2010)

Xia et al. A consensus linkage map of the grass carp (
Ctenopharyngodon idella) based on microsatellites and SNPs. BMC Genomics (2010) pp. 1-16

2009 and older

Foncéka et al. Genetic mapping of wild introgressions into cultivated peanut: a way toward enlarging the genetic basis of a recent allotetraploid. BMC Plant Biol (2009) vol. 9 pp. 103

Diola, V., Caixeta, E. T., Zambolim, E. M., Sakiyama, N. S., Pereira, L. F. P., & Loureiro, M. E. (2009). MARCADORES SCARS PARA O GENE DE RESISTÊNCIA A H. vastatrix RAÇA IIb SÃO POSICIONADOS SIMULTANEAMENTE DENTRO DE UM ÚNICO CLONE BAC.

Guyot et al. Microcollinearity in an ethylene receptor coding gene region of the
Coffea canephora genome is extensively conserved with Vitis vinifera and other distant dicotyledonous sequenced genomes. BMC Plant Biol (2009) vol. 9 pp. 22

Tran and al. Linkage mapping of ayu (
Plecoglossus altivelis) based on AFLP and new microsatellite markers using backcross generation produced from homozygous clone line. Proceedings of the 5th World Fisheries Congress. Oct 20-24, 2008, Yokohama, Japan (2009)

Votintseva and Filatov. Evolutionary Strata in a Small Mating-Type-Specific Region of the Smut Fungus
Microbotryum violaceum. Genetics (2009) vol. 182 (4) pp. 1391-1396

Zhang and Gai. Methodologies for segregation analysis and QTL mapping in plants. Genetica (2009) vol. 136 pp. 311-318

N'Diaye and al. Genetic basis of species differentiation between Coffea liberica Hiern and C. canephora Pierre: Analysis of an interspecific cross. Genet Resour Crop Evol (2007) vol. 54 pp. 1011-1021

Rogers et al. Linkage maps of the dwarf and Normal lake whitefish (
Coregonus clupeaformis) species complex and their hybrids reveal the genetic architecture of population divergence. Genetics (2007) vol. 175 (1) pp. 375-98

Xian-Liang et al. Segregation distortion and its effect on genetic mapping in plants. Chinese Journal of Agricultural Biotechnology (2007) vol. 3 (03) pp. 163-169

Zhu and al. Modeling segregation distortion for viability selection I. Reconstruction of linkage maps with distorted markers. Theor Appl Genet (2007) vol. 114 pp. 295-305

Zhu and al. Reconstruction of linkage maps in the distorted segregation populations of backcross, doubled haploid and recombinant inbred lines. Chinese Science Bulletin (2007) vol. 52 pp. 1648-1653 (
回交、DH RIL 偏分离群体遗传图谱的重新构建)

Mahesh et al. Isolation and genetic mapping of a
Coffea canephora phenylalanine ammonia-lyase gene (CcPAL1) and its involvement in the accumulation of caffeoyl quinic acids. Plant Cell Rep (2006) vol. 25 (9) pp. 986-992

Rogers and Bernatchez. The genetic basis of intrinsic and extrinsic post-zygotic reproductive isolation jointly promoting speciation in the lake whitefish species complex (
Coregonus clupeaformis). J Evol Biol (2006) vol. 19 (6) pp. 1979-94

Marri et al. Identification and mapping of yield and yield related QTLs from an Indian accession of
Oryza rufipogon. BMC Genet (2005) vol. 6 pp. 33

Scarcelli and al. Segregation patterns of isozyme loci and microsatellite markers show the diploidy of African yam
Dioscorea rotundata (2n = 40). Theor Appl Genet (2005) vol. 111 pp. 226-232

Aluko and al. t (2004) QTL mapping of grain quality traits from the interspecific cross
Oryza sativa × O. glaberrima. Theoretical and Applied Genetics 109:630-639

Yin and al. Genetic and Physical Mapping of
Melampsora Rust Resistance Genes in Populus and Characterization of Linkage Disequilibrium and Flanking Genomic Sequence. New Phytologist (2004) vol. 164 pp. 95-105

Akafou and al. Identification and mapping of a major gene (Ft1) involved in fructification time in the interspecific cross
Coffea pseudozanguebariae x C. liberica var. Dewevrei: impact on caffeine content and seed weight. Theor Appl Genet (2003) vol. 106 (1486-1490) pp. 1-5

Campa et al. Genetic mapping of a caffeoyl-coenzyme A 3-O-methyltransferase gene in coffee trees. Impact on chlorogenic acid content. Theor Appl Genet (2003) vol. 107 (4) pp. 751-756

Coulibaly and al. AFLP and SSR polymorphism in a Coffea interspecific backcross progeny [(
C. heterocalyx x C. canephora) x C. canephora]. Theor Appl Genet (2003) vol. 107 pp. 1148-1155

Langar and al. Combined mapping of DALP and AFLP markers in cultivated sunflower using F9 recombinant inbred lines. Theor Appl Genet (2003) vol. 106 (1068-1074) pp. 1-7

Lorieux et al. Linkage mapping of Hsa-1(Og), a resistance gene of African rice to the cyst nematode,
Heterodera sacchari. Theor Appl Genet (2003) vol. 107 (4) pp. 691-696

Sallaud et al. Identification of five new blast resistance genes in the highly blast-resistant rice variety IR64 using a QTL mapping strategy. Theor Appl Genet (2003) vol. 106 (5) pp. 794-803

Teunissen and al. Construction of a mitotic linkage map of
Fusarium oxysporum based on Foxy -AFLPs. Mol Gen Genetics (2003) vol. 269 pp. 215-226

Bres-Patry and al. Heredity and genetic mapping of domestication-related traits in a temperate japonica weedy rice. Theoretical and Applied Genetics (2001) vol. 102 pp. 118-126

Ky and al. Interspecific genetic linkage map, segregation distortion and genetic conversion in coffee (
Coffea sp.). Theoretical and Applied Genetics (2000) vol. 101 pp. 669-676

Lorieux et al. A first interspecific
Oryza sativa × Oryza glaberrima microsatellite-based genetic linkage map. Theor Appl Genet (2000) vol. 100 pp. 593-601