CSSL Finder features
CSSL Finder aims to help at developing, managing and analyzing advanced introgression lines, like Chromosome Segment Substitution Lines, or CSSLs.
The main features of this program are:
- find the best set of lines that maximizes the donor genome coverage, with the smallest undesirable genetic background,
- display graphical genotypes of this set,
- display graphical phenotypic values of these lines.
- look for QTLs through ANOVA 1 analysis (including permutation tests for empirical threshold determination),
- obtain statistics on lines and markers,
Several other features are available, that you will discover while playing with the different options.
